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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913789.1_cds_XP_016463794.1_56886
CDS Infomation

[gene=LOC107786805] [db_xref=GeneID:107786805] [protein=deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog] [protein_id=XP_016463794.1] [location=complement(join(39463..39564,39654..39764,39850..39865,40008..40099,40175..40255,40358..40459,40542..40634,40766..40839,40922..40977,41081..41143,41254..41321,41506..41544,42158..42248,42846..42930,43018..43069,43157..43263,44219..44241,44528..44565,45535..45657))] [gbkey=CDS]
Sequence

ATGGGAGCTTTTTGTAATGAAGACCTCAGTTTCTCTTCCAATTACAACTTCCCTTCGTCT
CAAGATCTCAGATTCTCTAAGCAAATCCATGACAACGTCCACGGCAACATCTATATCGAC
CCGCTCTTCCTGAAGTTCATTGACACAGAACAATTTCAGAGGCTTCGTGATCTTAAACAA
CTAGGTGTGGCACACATGGTCTATCCAGGAGCGGTGCATTCTAGATTTGAGCATTCCCTT
GGAGTGTATTGGATTGCCAGTGAAGCTATCAATAAGCTTAAAACCCACCAAGGTATGGAG
CTTGGAATTGATCACTTTGATATACAGACTGTGAAACTTGCAGGTCTTCTGCATGATATA
GGCCATGGACCTTTTAGTCACTTGTTTGAACGCGAGTTTCTTCCTAAAGTTCGCAATGGA
TTGGACTGGTCTCATGAGCAAATGTCAGTGGATATGATTGATCACATCGTTGATGAGCGT
CATATTGATATTGATTCAGAAACCATTAAAAAAGTCAAGGAAATGATACTTGCTAGTTCC
AAGTTTGCATTGACAAAAAGCTCAAGGGAGAAGCAGTTTTTATATGATATTGTGGCAAAT
GGTCGAAATGGAATCGATGTTGACAAGTTTGATTACATTGTCCGAGATAGCCGCGCGTGT
GGTCTAGGATGCAATTTTCAGTTCCAGAGGTTAATGGAAACAATGAGAGTTTTAGGAGAT
GAGATATGCTACAGAGCCAAAGACTATTTAACGATCTACAAGTTATTTGCCACACGAGCT
GATCTACACAGAACTGTTTATACTCATGCTAAAGTGAAGGCAATAGAGCTTATGGTTGTA
GATGCACTAGTGAAGGCAAATGATTATCTACAGATAGCATCTCATATAGAGCATCCTTCT
CAATATTGGAAGTTAGATGACACCATCTTGAAAACGATTGAGACTGCTCCAGACCCAGAA
CTGAAGGAATCTAGGGATTTGATCCTTCGCGTTCGAAGGAGAGATTTGTACCAGTTCTGT
AATGAGTATGCTGTTCCCAGAGACAAAATAGAGCATTTCAAGGATGTCACTGCACATGAT
ATCATCTGTTCACAGAAAAGTGGCTGTGAGAGACTTAAAGAAGAGGATGTTGCTGTTAGC
AATGTGAAGATAGATCTGACTCGTGGGAGGCATAATCCTCTTGAAAGTATCCATTTTTTC
AAGGATTATGAAAGTGACGAGAAATTCTCTATACCTGATGATCGTATCAGCCACTTGCTG
CCAACATCATATCAAGATATGATTGTGAGGGTGTACTCCAAAAAGCCCCACCTGGTGGGA
ACTATTTCTGATGCATTTGAAAATTTCCAATTGAAGACTTATGGAATAAAAGCACAGGTT
CATGCAACACCTGAGAAGAAAAAACGTCGTATATGA

Peptide Sequence

PEP ID

XP_016463794.1
PEP Infomation

PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog [Nicotiana tabacum]
Sequence

MGAFCNEDLSFSSNYNFPSSQDLRFSKQIHDNVHGNIYIDPLFLKFIDTEQFQRLRDLKQ
LGVAHMVYPGAVHSRFEHSLGVYWIASEAINKLKTHQGMELGIDHFDIQTVKLAGLLHDI
GHGPFSHLFEREFLPKVRNGLDWSHEQMSVDMIDHIVDERHIDIDSETIKKVKEMILASS
KFALTKSSREKQFLYDIVANGRNGIDVDKFDYIVRDSRACGLGCNFQFQRLMETMRVLGD
EICYRAKDYLTIYKLFATRADLHRTVYTHAKVKAIELMVVDALVKANDYLQIASHIEHPS
QYWKLDDTILKTIETAPDPELKESRDLILRVRRRDLYQFCNEYAVPRDKIEHFKDVTAHD
IICSQKSGCERLKEEDVAVSNVKIDLTRGRHNPLESIHFFKDYESDEKFSIPDDRISHLL
PTSYQDMIVRVYSKKPHLVGTISDAFENFQLKTYGIKAQVHATPEKKKRRI

Transcript Sequence

Gene sequence data has not been registered.